Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ALO41_100325 | P77463 | Negative | 1898022 - 1898876 | 30149.5 |
| abc transporter permease | ALO41_01238 | P77308 | Negative | 1898873 - 1899877 | 35356.7 |
| 4-aminobutyrate aminotransferase | ALO41_102331 | Q8BWU8 | Negative | 1902007 - 1904976 | 107531.0 |
| dtdp-glucose 4,6-dehydratase | ALO41_03590 | P55294 | Positive | 1905120 - 1906241 | 41869.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | ALO41_03591 | Q9HU21 | Positive | 1906322 - 1906867 | 20476.1 |
| sensor histidine kinase | ALO41_05427 | Not Available | Positive | 1906903 - 1908849 | 71738.5 |
| sigma-54 dependent dna-binding response regulator | ALO41_03593 | Not Available | Positive | 1908846 - 1910231 | 50401.4 |
| uncharacterized protein | ALO41_03594 | Not Available | Positive | 1910218 - 1910691 | 17887.5 |
| 3',5'-bisphosphate nucleotidase | ALO41_03595 | Q8FAG5 | Negative | 1911083 - 1911925 | 30269.9 |
| mutt/nudix family protein | ALO41_03596 | P45799 | Negative | 1911922 - 1912488 | 20821.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








