Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter, permease protein cysw | ALO41_02588 | P0AEB1 | Positive | 1872257 - 1873129 | 31539.2 |
| sulfate/thiosulfate import atp-binding protein cysa | ALO41_02589 | Q88AS5 | Positive | 1873132 - 1874112 | 36798.1 |
| pyridine nucleotide-disulfide oxidoreductase | ALO41_02590 | Q9Y6N5 | Negative | 1875146 - 1876402 | 45256.6 |
| sigma-54 dependent transcriptional regulator | ALO41_02592 | P25852 | Positive | 1877578 - 1878900 | 48521.4 |
| phage integrase family site specific recombinase | ALO41_01930 | A1AKP9 | Positive | 1879306 - 1880268 | 35380.3 |
| ispsy3, transposase | ALO41_03300 | Not Available | Negative | 1880982 - 1881173 | 6948.81 |
| ispsy18, transposase | ALO41_04593 | P80011 | Positive | 1881339 - 1881659 | 11870.3 |
| putative lipid a biosynthesis lauroyl acyltransferase | ALO41_02969 | Not Available | Negative | 1882517 - 1883404 | 32566.9 |
| dna-3-methyladenine glycosidase i | ALO41_102356 | P05100 | Negative | 1883443 - 1884072 | 23448.5 |
| glycyl-trna synthetase subunit alpha | ALO41_05263 | Q88B36 | Positive | 1884015 - 1885022 | 38361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








