Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor sui1-related protein | ALO41_04518 | P45116 | Positive | 1617588 - 1617959 | 12769.6 |
| biosynthetic arginine decarboxylase | ALO41_04519 | Q87VU3 | Positive | 1618060 - 1619973 | 71351.7 |
| rhs element vgr protein | ALO41_04520 | Not Available | Positive | 1620296 - 1621702 | 51899.6 |
| esterase/lipase/thioesterase family protein | ALO41_100543 | Q8VYP9 | Positive | 1621753 - 1622685 | 33471.3 |
| dna-damage-inducible protein f | ALO41_04521 | P28303 | Negative | 1622679 - 1624019 | 48117.8 |
| putative lipoprotein | ALO41_04522 | P76578 | Positive | 1624282 - 1629249 | 180394.0 |
| hypothetical protein | ALO41_200077 | Not Available | Negative | 1629397 - 1629885 | 18389.4 |
| hypothetical protein | ALO41_200241 | Q9HVD1 | Positive | 1630172 - 1630690 | 18326.4 |
| hypothetical protein | ALO41_200122 | Not Available | Positive | 1631005 - 1632426 | 51916.0 |
| rhs element vgr protein | ALO41_01945 | Not Available | Positive | 1633255 - 1633605 | 11897.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








