Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase | ALO41_00519 | Not Available | Positive | 1608460 - 1609488 | 38849.2 |
| dna topoisomerase | ALO41_03324 | Q5HLZ4 | Negative | 1609550 - 1609915 | 13206.0 |
| sensory box sensor histidine kinase/response regulator | ALO41_01763 | Q881J7 | Negative | 1610517 - 1611278 | 27451.8 |
| hypothetical protein | ALO41_200259 | Not Available | Negative | 1611598 - 1612257 | 23381.3 |
| hypothetical protein | ALO41_200134 | Not Available | Positive | 1612630 - 1612803 | 6338.32 |
| luxr family dna binding response regulator | ALO41_04514 | Q9HWA4 | Positive | 1612998 - 1613810 | 30284.6 |
| response regulator, putative/diguanylate cyclase | ALO41_05647 | Not Available | Negative | 1613818 - 1615473 | 62072.5 |
| hypothetical protein | ALO41_101739 | Not Available | Positive | 1615429 - 1615614 | 6706.18 |
| uncharacterized protein | ALO41_04516 | Not Available | Positive | 1615775 - 1616854 | 39805.3 |
| mutt/nudix family protein | ALO41_04517 | Q9HUW9 | Positive | 1616854 - 1617399 | 20286.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








