Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inci1 plasmid conjugative transfer protein tran | ALO41_02760 | Not Available | Positive | 1447627 - 1448313 | 24370.2 |
| trao protein | ALO41_05203 | Not Available | Positive | 1448202 - 1448744 | 19942.7 |
| trak protein | ALO41_04283 | Not Available | Negative | 1448870 - 1449157 | 11450.3 |
| uncharacterized protein | ALO41_04284 | Not Available | Negative | 1449186 - 1449326 | 5026.12 |
| unknown protein sequence | ALO41_04285 | Not Available | Positive | 1449484 - 1449876 | 14204.2 |
| hypothetical protein | ALO41_102746 | Not Available | Negative | 1449984 - 1450196 | 7889.41 |
| uncharacterized protein | ALO41_04286 | Not Available | Negative | 1450189 - 1450437 | 8942.86 |
| hypothetical protein | ALO41_101500 | Not Available | Negative | 1450475 - 1450708 | 8758.57 |
| type iv pilus bioproteinsis protein | ALO41_04287 | P52052 | Negative | 1450740 - 1451918 | 43977.7 |
| trai protein | ALO41_04288 | Not Available | Negative | 1451915 - 1452715 | 29863.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








