Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ALO41_04499 | Not Available | Positive | 1308959 - 1309609 | 24500.8 |
| histidine kinase | ALO41_04500 | Not Available | Positive | 1309606 - 1309944 | 12125.5 |
| hypothetical protein | ALO41_102070 | Not Available | Negative | 1309935 - 1310057 | 4409.32 |
| regulatory protein, arsr | ALO41_04501 | O31480 | Negative | 1310086 - 1310421 | 12376.0 |
| xenobiotic reductase a | ALO41_04502 | Q5KXG9 | Positive | 1310481 - 1311572 | 39851.2 |
| urease accessory protein ured | ALO41_04503 | Q883F5 | Negative | 1311641 - 1312498 | 30451.2 |
| urease accessory protein ureg | ALO41_04504 | A5EJY3 | Negative | 1312495 - 1313157 | 23780.6 |
| urease subunit alpha | ALO41_05646 | Q4ZUD2 | Negative | 1313184 - 1314896 | 61313.7 |
| urease subunit alpha | ALO41_04506 | Q883F3 | Negative | 1314900 - 1315595 | 25027.0 |
| urease accessory protein uref | ALO41_04507 | Q883F2 | Negative | 1315623 - 1316360 | 26694.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








