Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | ALO41_05489 | P33641 | Negative | 1238719 - 1239825 | 41415.7 |
| pseudouridine synthase | ALO41_03815 | P33640 | Positive | 1239891 - 1240853 | 35537.0 |
| aaa atpase, central region:clp, n terminal:clp, n terminal | ALO41_03816 | Q889C2 | Positive | 1241749 - 1242201 | 16382.0 |
| clpb protein | ALO41_100009 | Not Available | Positive | 1241981 - 1244314 | 87033.7 |
| uncharacterized protein | ALO41_00984 | P77562 | Negative | 1244819 - 1245916 | 40401.4 |
| glutaminase | ALO41_04758 | Q48HR7 | Negative | 1245970 - 1246908 | 33690.0 |
| aldolase ii superfamily protein | ALO41_00986 | Q9A8Z4 | Negative | 1246949 - 1247764 | 29446.9 |
| putative abc transporter, periplasmic substrate-binding protein | ALO41_00987 | Not Available | Positive | 1247998 - 1249035 | 37702.0 |
| tonb-dependent receptor:tonb-dependent receptor | ALO41_04759 | Q05098 | Negative | 1249457 - 1251955 | 90011.9 |
| tonb system transport protein exbd2 | ALO41_00988 | Not Available | Negative | 1252140 - 1252541 | 14312.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








