Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pilx | ALO41_03806 | Not Available | Positive | 1224935 - 1225441 | 17882.8 |
| putative type iv pilus-associated protein | ALO41_03807 | S0HPF7 | Positive | 1225428 - 1228628 | 113140.0 |
| type iv pilus bioproteinsis protein | ALO41_03808 | G3XD43 | Positive | 1228640 - 1229050 | 14388.1 |
| glycine oxidase thio | ALO41_03809 | Q88Q83 | Positive | 1229078 - 1230190 | 39731.7 |
| rnd efflux transporter | ALO41_05487 | A8AEE6 | Negative | 1230193 - 1233282 | 112353.0 |
| rnd family efflux transporter mfp subunit | ALO41_03810 | Not Available | Negative | 1233279 - 1234388 | 39313.0 |
| transcriptional regulator, tetr family | ALO41_03811 | Not Available | Negative | 1234470 - 1235156 | 25800.8 |
| type iv fimbriae expression regulatory protein pilr | ALO41_05488 | Q00934 | Negative | 1235428 - 1237185 | 65357.1 |
| type iv pilus sensor protein pils | ALO41_100121 | P33639 | Negative | 1236768 - 1238360 | 58177.6 |
| uncharacterized protein | ALO41_03813 | Not Available | Negative | 1238350 - 1238589 | 8913.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








