Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s20 | ALO41_03798 | Q48NK9 | Negative | 1214652 - 1214930 | 10012.3 |
| hypothetical protein | ALO41_102396 | Not Available | Negative | 1215060 - 1215293 | 8477.7 |
| protein murj -like protein | ALO41_03799 | P37169 | Positive | 1215223 - 1216719 | 54870.3 |
| bifunctional riboflavin kinase/fmn adenylyltransferase | ALO41_03800 | P22990 | Positive | 1216842 - 1217768 | 33885.8 |
| isoleucine--trna ligase | ALO41_03801 | Q48NK6 | Positive | 1217789 - 1220620 | 105928.0 |
| lipoprotein signal peptidase | ALO41_03802 | Q889E3 | Positive | 1220613 - 1221119 | 18893.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | ALO41_03803 | Q48NK3 | Positive | 1221646 - 1222593 | 34416.9 |
| type iv pilus bioproteinsis protein | ALO41_03804 | Not Available | Negative | 1222600 - 1223100 | 17978.6 |
| type iv pilin | ALO41_03805 | Not Available | Positive | 1223232 - 1223714 | 16849.4 |
| type 4 fimbrial bioproteinsis protein pilv | ALO41_100144 | Not Available | Positive | 1223704 - 1224219 | 17909.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








