Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fused ispsy20 transposase istb/transcriptional regulator lysr family protein | ALO41_03779 | Not Available | Negative | 1195702 - 1196691 | 37123.7 |
| methylmalonate-semialdehyde dehydrogenase | ALO41_03780 | Q0WM29 | Positive | 1196808 - 1198334 | 54177.1 |
| 3-hydroxyisobutyrate dehydrogenase | ALO41_03781 | Q54CX6 | Positive | 1198368 - 1199255 | 30185.4 |
| gamma-glutamyltransferase | ALO41_03782 | P36267 | Positive | 1199461 - 1201188 | 61116.3 |
| phosphonate abc transporter, inner membrane subunit | ALO41_03783 | A0A140NFA3 | Negative | 1201256 - 1202023 | 27196.8 |
| phosphonate abc transporter permease | ALO41_03784 | Not Available | Negative | 1202020 - 1202847 | 29281.4 |
| phosphonates import atp-binding protein phnc | ALO41_03785 | Q48NM1 | Negative | 1202841 - 1203638 | 28793.0 |
| phosphonate abc transporter periplasmic phosphonate-binding protein | ALO41_03786 | A3PC74 | Negative | 1203635 - 1204486 | 30896.9 |
| selenophosphate synthetase | ALO41_03787 | Q889F7 | Positive | 1204572 - 1205756 | 42186.7 |
| trna 2-selenouridine synthase | ALO41_03788 | Q4ZYK5 | Positive | 1205756 - 1206856 | 41246.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








