Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. ulmi strain ICMP3962 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1316248 bp
Thymine Count
1306428 bp
Guanine Count
1803600 bp
Cytosine Count
1813726 bp
Genome Length
6244155 bp
Protein-coding Genes
5614 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyltransferase | ALO41_04933 | Q88AS0 | Negative | 1016055 - 1017215 | 42829.7 |
| ferric iron abc transporter, permease protein | ALO41_04934 | P71338 | Negative | 1017290 - 1018945 | 59895.2 |
| ferric iron abc transporter, iron-binding protein | ALO41_01723 | Q9HTX3 | Negative | 1019177 - 1020178 | 36606.6 |
| membrane protein | ALO41_100678 | Not Available | Positive | 1021027 - 1021602 | 20768.8 |
| uncharacterized protein | ALO41_01724 | P38942 | Negative | 1021609 - 1023570 | 72809.9 |
| cytochrome c5 | ALO41_01725 | P00121 | Negative | 1023685 - 1024008 | 11137.5 |
| helix-turn-helix motif protein | ALO41_01726 | Not Available | Negative | 1024033 - 1024647 | 22241.7 |
| alanine racemase | ALO41_04938 | Q48PY9 | Negative | 1024706 - 1025956 | 45631.4 |
| endoribonuclease l-psp family protein | ALO41_01728 | Not Available | Negative | 1025868 - 1026221 | 12863.5 |
| d-amino acid dehydrogenase small subunit | ALO41_01729 | Q48PZ1 | Negative | 1026193 - 1027494 | 47073.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.








