Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. syringae strain ICMP3023 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1253511 bp
Thymine Count
1238503 bp
Guanine Count
1783486 bp
Cytosine Count
1797443 bp
Genome Length
6073080 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
119 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALO45_01441 | Not Available | Positive | 5019000 - 5019917 | 34039.0 |
| type iii effector locus protein | ALO45_01442 | Q98E66 | Negative | 5020005 - 5021012 | 37787.2 |
| type iii effector hopaa1 | ALO45_100232 | Not Available | Positive | 5021126 - 5022733 | 55995.3 |
| type iii helper protein hrpw1 | ALO45_01443 | Not Available | Negative | 5022817 - 5024136 | 44506.0 |
| uncharacterized protein | ALO45_01444 | Not Available | Positive | 5024547 - 5024936 | 14419.1 |
| type iii effector avre | ALO45_04677 | Not Available | Negative | 5024998 - 5030373 | 194661.0 |
| slt protein | ALO45_01446 | P0AEZ8 | Positive | 5030592 - 5032115 | 55953.8 |
| type iii secretion system transcriptional regulator hrps | ALO45_01447 | P37931 | Positive | 5034181 - 5035089 | 33382.5 |
| type iii secretion system helper protein hrpa2 | ALO45_01448 | Q52420 | Positive | 5035182 - 5035508 | 11006.8 |
| harpin | ALO45_01449 | O87653 | Positive | 5035558 - 5036589 | 34722.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









