Pseudomonas amygdali pv. sesami strain ICMP763

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. sesami strain ICMP763 is a Gram-negative, rod-shaped bacterium distinguished by its motility. This strain possesses a single replicon, indicating a streamlined genomic architecture that may facilitate its adaptability. Pseudomonas amygdali pv. sesami is known to infect several host plants, including Olea europaea (olive), Mallotus japonicus, Loropetalum chinense, and Prunus dulcis (almond). The interactions between this bacterium and its plant hosts are significant, particularly because the strain is associated with leaf spot diseases. Leaf spot can adversely affect the aesthetic and agricultural value of the infected plants, leading to potential economic losses in affected crops. In terms of its ecological role, Pseudomonas amygdali pv. sesami strain ICMP763 exemplifies the complex relationships between pathogens and their plant hosts. The ability to infect multiple species reflects its adaptive strategies, which may involve the secretion of virulence factors that facilitate colonization and disease development. Understanding the specific mechanisms of pathogenicity and host interactions could inform strategies for managing and mitigating the impact of this bacterium on agriculture. Further research into the biology of this strain could enhance our knowledge of disease management in the crops it affects, contributing to more sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. sesami strain ICMP763

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. sesami strain ICMP763
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Olea europaea, Mallotus japonicus, Loropetalum chinense
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas amygdali pv. sesami strain ICMP763

Gene Summary

Adenine Count

1258748 bp

Thymine Count

1261894 bp

Guanine Count

1752964 bp

Cytosine Count

1749677 bp

Genome Length

6028682 bp

Protein-coding Genes

5451 genes

Non-Coding Genes

134 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
effector protein hopm1ALO93_04730Not AvailableNegative1428951 - 143118578152.0
type iii chaperone protein shcmALO93_01626Not AvailableNegative1431182 - 143170919501.2
type iii helper protein hrpw1ALO93_01627Not AvailablePositive1431979 - 143325943951.9
type iii effector hopaa1-1ALO93_04732Not AvailableNegative1433346 - 143489053702.4
hypothetical proteinALO93_102097Not AvailablePositive1434805 - 143511010998.1
uncharacterized proteinALO93_01629Not AvailablePositive1435177 - 143612135190.7
hypothetical proteinALO93_101543Not AvailableNegative1436161 - 14362894190.24
two-component sensor histidine kinaseALO93_04733Not AvailableNegative1436308 - 143893894499.9
short-chain dehydrogenase/reductase sdrALO93_04734Not AvailableNegative1439250 - 144008329571.0
transcriptional regulatory proteinALO93_01631Not AvailableNegative1440174 - 144109734354.3

Displaying genes 1391 – 1400 of 5585 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Leaf spotCausesPMC9343901

Displaying health effects 1 – 1 of 1 in total