Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. sesami strain ICMP763 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Olea europaea, Mallotus japonicus, Loropetalum chinense |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1258748 bp
Thymine Count
1261894 bp
Guanine Count
1752964 bp
Cytosine Count
1749677 bp
Genome Length
6028682 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
134 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hrpd | ALO93_01615 | Not Available | Negative | 1415353 - 1415883 | 20195.9 |
| type iii secretion protein hrcj | ALO93_01616 | Not Available | Negative | 1415880 - 1416689 | 29441.9 |
| type iii secretion protein hrpb | ALO93_01617 | Not Available | Negative | 1416698 - 1417072 | 12821.3 |
| harpin protein hrpz | ALO93_01618 | Not Available | Negative | 1417100 - 1418110 | 34341.3 |
| hrpa | ALO93_01619 | Not Available | Negative | 1418164 - 1418478 | 11243.1 |
| type iii transcriptional regulator hrps | ALO93_04726 | Not Available | Negative | 1418573 - 1419484 | 33387.5 |
| hrpr | ALO93_01621 | Not Available | Negative | 1419532 - 1420452 | 34199.6 |
| hrp-associated lytic transglycosylase | ALO93_04727 | Not Available | Negative | 1421602 - 1423080 | 54001.7 |
| type iii effector avre1 | ALO93_04728 | Not Available | Positive | 1423246 - 1428435 | 187886.0 |
| type iii chaperone protein avrf | ALO93_01624 | Not Available | Negative | 1428484 - 1428873 | 14399.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







