Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. cunninghamiae strain ICMP11894 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1200914 bp
Thymine Count
1214001 bp
Guanine Count
1683846 bp
Cytosine Count
1676841 bp
Genome Length
5782633 bp
Protein-coding Genes
5313 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector hopa1 | ALO74_04056 | Not Available | Negative | 2575420 - 2576259 | 30470.4 |
| type iii chaperone protein scha | ALO74_04057 | Not Available | Negative | 2576581 - 2577051 | 17456.5 |
| type iii helper protein hrpk | ALO74_04058 | Not Available | Negative | 2577108 - 2579414 | 79996.3 |
| rna polymerase sigma factor | ALO74_04059 | Not Available | Negative | 2579488 - 2580042 | 21181.3 |
| type iii secretion component protein hrcj | ALO74_04060 | Not Available | Positive | 2580286 - 2581392 | 40576.3 |
| type iii secretion component protein hrcv | ALO74_04061 | Not Available | Positive | 2581389 - 2583476 | 76606.0 |
| putative hrp/hrc protein | ALO74_04062 | Not Available | Positive | 2583510 - 2584484 | 35378.3 |
| type iii secretion system cytoplasmic atpase | ALO74_04063 | Not Available | Positive | 2584481 - 2585830 | 48395.5 |
| type iii secretion system protein | ALO74_04064 | Not Available | Positive | 2585833 - 2586279 | 17382.5 |
| type iii secretion system protein | ALO74_04065 | Not Available | Positive | 2586286 - 2586858 | 20428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









