Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole-4-carboxamide isomerase | ALO42_04798 | Not Available | Negative | 1005166 - 1005877 | 24892.1 |
| uncharacterized protein | ALO42_01844 | Not Available | Negative | 1005987 - 1006265 | 10792.0 |
| imidazole glycerol phosphate synthase subunit hish | ALO42_01845 | Not Available | Negative | 1006252 - 1006890 | 23524.0 |
| aromatic amino acid aminotransferase | ALO42_101400 | Not Available | Negative | 1007577 - 1008806 | 44477.5 |
| putative oxalate/formate antiporter | ALO42_101825 | Not Available | Negative | 1008991 - 1010682 | 59952.4 |
| hypothetical protein | ALO42_101206 | Not Available | Negative | 1010658 - 1010783 | 4685.77 |
| hypothetical protein | ALO42_101572 | Not Available | Negative | 1011005 - 1011130 | 4557.57 |
| asma family protein | ALO42_01846 | Not Available | Positive | 1011149 - 1013374 | 80047.0 |
| a/g-specific adenine glycosylase | ALO42_01847 | Not Available | Positive | 1013457 - 1014524 | 39885.0 |
| Trna-phe | Not Available | Not Available | Positive | 1014895 - 1014970 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









