Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sel1 repeat-containing protein | ALO42_01704 | Not Available | Negative | 992689 - 993510 | 29590.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | ALO42_04744 | Not Available | Negative | 993805 - 995157 | 47852.3 |
| thiamine-phosphate synthase | ALO42_01706 | Not Available | Negative | 995371 - 995988 | 22066.6 |
| bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase | ALO42_01707 | Not Available | Negative | 996012 - 996809 | 28443.3 |
| hybrid sensor histidine kinase lads | ALO42_01708 | Not Available | Positive | 997136 - 999169 | 75282.3 |
| acyl-coa dehydrogenase | ALO42_01709 | Not Available | Positive | 999292 - 1000941 | 59817.4 |
| amp nucleosidase | ALO42_01710 | Not Available | Positive | 1000994 - 1002457 | 54567.6 |
| pseudouridine synthase | ALO42_01711 | Not Available | Positive | 1002483 - 1003169 | 25964.4 |
| asnc family transcriptional regulator | ALO42_01712 | Not Available | Negative | 1003183 - 1003674 | 18565.6 |
| amino acid adenylation | ALO42_04722 | Not Available | Positive | 1004649 - 1005165 | 19146.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









