Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, delta subunit | ALO42_01694 | Not Available | Negative | 981079 - 982116 | 37377.2 |
| lps-assembly lipoprotein lpte | ALO42_01695 | Not Available | Negative | 982158 - 982763 | 22155.3 |
| leucine--trna ligase | ALO42_04738 | Not Available | Negative | 982853 - 985459 | 96955.2 |
| uncharacterized protein | ALO42_01697 | Not Available | Positive | 985772 - 986113 | 12323.7 |
| uncharacterized protein | ALO42_01698 | Not Available | Positive | 986215 - 986985 | 28186.4 |
| apolipoprotein n-acyltransferase | ALO42_04739 | Not Available | Negative | 987052 - 988578 | 56259.9 |
| magnesium and cobalt efflux protein corc | ALO42_01700 | Not Available | Negative | 988601 - 989443 | 31398.5 |
| endoribonuclease ybey | ALO42_01701 | Not Available | Negative | 989449 - 989949 | 18850.9 |
| putative phosphate starvation-inducible atpase phoh | ALO42_04741 | Not Available | Negative | 989942 - 990964 | 38439.2 |
| pp_00887 | ALO42_04742 | Not Available | Negative | 991141 - 992469 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









