Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative two-component sensor ppra | ALO42_01676 | Not Available | Positive | 960385 - 963165 | 104130.0 |
| uncharacterized protein | ALO42_04735 | Not Available | Negative | 963162 - 965225 | 69500.9 |
| putative pap2 superfamily membrane-associated protein | ALO42_04736 | Not Available | Negative | 965333 - 966649 | 47069.1 |
| putative 3-methyladenine dna glycosylase | ALO42_01678 | Not Available | Negative | 966653 - 967324 | 24885.8 |
| gamma-glutamyl phosphate reductase | ALO42_01679 | Not Available | Positive | 967610 - 968875 | 44934.0 |
| putative nicotinate-nucleotide adenylyltransferase | ALO42_01680 | Not Available | Positive | 968889 - 969557 | 24436.4 |
| ribosomal silencing factor rsfs | ALO42_01681 | Not Available | Positive | 969618 - 970004 | 13914.5 |
| ribosomal rna large subunit methyltransferase h | ALO42_01682 | Not Available | Positive | 970014 - 970481 | 17728.7 |
| penicillin-binding protein 2 | ALO42_01683 | Not Available | Positive | 970510 - 972405 | 70170.3 |
| rod shape-determining protein roda | ALO42_01684 | Not Available | Positive | 972395 - 973540 | 41742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









