Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type vi secretion system effector, vgrg family | ALO42_01667 | Not Available | Negative | 950936 - 952060 | 41125.5 |
| biosynthetic arginine decarboxylase | ALO42_01668 | Not Available | Negative | 952318 - 954231 | 71310.7 |
| translation initiation factor sui1 | ALO42_01669 | Not Available | Negative | 954320 - 954691 | 12783.6 |
| nudix family hydrolase | ALO42_01670 | Not Available | Negative | 954880 - 955425 | 20224.9 |
| uncharacterized protein | ALO42_01671 | Not Available | Negative | 955425 - 956504 | 39708.2 |
| hypothetical protein | ALO42_101722 | Not Available | Negative | 956625 - 956813 | 6692.15 |
| two-component response regulator with ggdef domain | ALO42_01672 | Not Available | Positive | 956769 - 958424 | 62186.6 |
| luxr family dna binding response regulator | ALO42_01673 | Not Available | Negative | 958432 - 959226 | 29630.7 |
| flp prepilin peptidase fppa | ALO42_01674 | Not Available | Negative | 959394 - 959867 | 16926.2 |
| uncharacterized protein | ALO42_01675 | Not Available | Positive | 959940 - 960395 | 16373.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









