Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein, atpase tadz/cpae | ALO42_01660 | Not Available | Negative | 935765 - 936955 | 43172.0 |
| bacterial type ii/iii secretion system protein | ALO42_100471 | Not Available | Negative | 936952 - 938211 | 43732.7 |
| flp pilus assembly protein rcpc/cpab | ALO42_01661 | Not Available | Negative | 938223 - 939203 | 34632.6 |
| flp pilus assembly protein, pilin flp | ALO42_01662 | Not Available | Positive | 939514 - 939720 | 7329.2 |
| two-component response regulator | ALO42_01663 | Not Available | Positive | 939762 - 940169 | 15462.7 |
| penicillin-binding protein 1c | ALO42_100375 | Not Available | Negative | 940295 - 942643 | 86354.2 |
| uncharacterized protein | ALO42_01664 | Not Available | Positive | 942739 - 943032 | 10729.5 |
| large extracellular alpha-helical protein, alpha-2-macroglobulin family | ALO42_04732 | Not Available | Negative | 943378 - 948342 | 180048.0 |
| dna-damage-inducible protein f | ALO42_01666 | Not Available | Positive | 948616 - 949956 | 48183.9 |
| esterase/lipase/thioesterase family protein | ALO42_100528 | Not Available | Negative | 949950 - 950924 | 34716.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









