Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_01643 | Not Available | Positive | 914627 - 915325 | 25944.2 |
| hypothetical protein | ALO42_101754 | Not Available | Positive | 915732 - 915953 | 8256.99 |
| uncharacterized protein | ALO42_01644 | Not Available | Positive | 915989 - 916624 | 23636.3 |
| membrane protein | ALO42_01645 | Not Available | Negative | 916632 - 917228 | 21511.1 |
| response regulator receiver:atp-binding region | ALO42_04726 | Not Available | Negative | 917298 - 920174 | 105714.0 |
| phosphoribosylamine--glycine ligase | ALO42_01647 | Not Available | Negative | 920178 - 921473 | 45548.4 |
| bifunctional purine biosynthesis protein purh | ALO42_04727 | Not Available | Negative | 921604 - 923229 | 58291.9 |
| fis family transcriptional regulator | ALO42_01649 | Not Available | Negative | 923289 - 923609 | 11722.1 |
| trna dihydrouridine synthase b | ALO42_100313 | Not Available | Negative | 923606 - 924676 | 38817.6 |
| uncharacterized protein | ALO42_01650 | Not Available | Negative | 924937 - 926265 | 49641.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









