Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_00099 | Not Available | Negative | 12642 - 13019 | 14339.3 |
| signal peptidase i | ALO42_00100 | Not Available | Negative | 13134 - 13988 | 32039.0 |
| elongation factor 4 | ALO42_00101 | Not Available | Negative | 13998 - 15794 | 66249.2 |
| alginate biosynthesis negative regulator, serine protease algy/mucd | ALO42_04278 | Not Available | Negative | 15966 - 17447 | 51951.6 |
| sigma factor algu regulatory protein mucb | ALO42_04279 | Not Available | Negative | 17696 - 18658 | 34839.6 |
| sigma factor algu regulatory protein muca | ALO42_00104 | Not Available | Negative | 18664 - 19254 | 20741.5 |
| rna polymerase sigma factor | ALO42_00105 | Not Available | Negative | 19288 - 19875 | 22530.7 |
| l-aspartate oxidase | ALO42_101177 | Not Available | Positive | 20313 - 21983 | 61915.3 |
| hypothetical protein | ALO42_100558 | Not Available | Negative | 21952 - 22416 | 17494.5 |
| sdh5 superfamily protein | ALO42_00106 | Not Available | Negative | 22400 - 22654 | 10328.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









