Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydrogenase family zn-dependent dehydrogenase | ALO42_00234 | Not Available | Positive | 878419 - 879549 | 41800.9 |
| dihydroxyacetone kinase, dihydroxyacetone binding subunit | ALO42_00235 | Not Available | Positive | 879605 - 880606 | 35306.7 |
| dihydroxyacetone kinase, atp-binding subunit | ALO42_00236 | Not Available | Positive | 880610 - 881272 | 23061.5 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALO42_100288 | Not Available | Negative | 881741 - 882538 | 29725.6 |
| alkylhydroperoxidase ahpd core | ALO42_00237 | Not Available | Negative | 882643 - 883230 | 21532.6 |
| uncharacterized protein | ALO42_00238 | Not Available | Negative | 883230 - 883793 | 19912.8 |
| oligopeptide abc transporter, periplasmic oligopeptide-binding protein oppa | ALO42_100191 | Not Available | Negative | 883828 - 885414 | 57843.7 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | ALO42_00239 | Not Available | Negative | 885445 - 886458 | 37265.1 |
| binding-protein-dependent transport (system) inner membrane component | ALO42_00240 | Not Available | Negative | 887458 - 888378 | 33068.5 |
| binding-protein dependent transport system inner membrane protein | ALO42_00241 | Not Available | Negative | 888375 - 889349 | 36055.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









