Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_100644 | Not Available | Negative | 865603 - 865797 | 7379.06 |
| deoxyribodipyrimidine photolyase-related protein | ALO42_00071 | Not Available | Negative | 865743 - 867281 | 58545.1 |
| tonb-dependent siderophore receptor | ALO42_00072 | Not Available | Positive | 867536 - 869704 | 79197.8 |
| trans-hexaprenyltranstransferase | ALO42_01497 | Not Available | Positive | 870581 - 870997 | 14990.5 |
| unknown protein sequence | ALO42_01498 | Not Available | Negative | 871010 - 871144 | 5123.28 |
| taue/safe-like exporter protein | ALO42_01499 | Not Available | Negative | 871144 - 871908 | 26482.7 |
| trna 2-selenouridine synthase | ALO42_04679 | Not Available | Negative | 871942 - 873045 | 41092.2 |
| phosphonate abc-type transport system, periplasmic substrate-binding protein | ALO42_01501 | Not Available | Positive | 874312 - 875163 | 30809.9 |
| phosphonate abc transporter, inner membrane subunit | ALO42_01502 | Not Available | Positive | 876775 - 877542 | 27230.8 |
| short chain dehydrogenase family protein | ALO42_00233 | Not Available | Positive | 877581 - 878404 | 28671.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









