Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_03517 | Not Available | Negative | 849128 - 849628 | 18410.3 |
| uncharacterized protein | ALO42_03518 | Not Available | Negative | 849660 - 851210 | 58994.7 |
| hemolysin co-regulated protein 1c | ALO42_03519 | Not Available | Positive | 851800 - 852318 | 19157.3 |
| rhs element vgr protein | ALO42_101297 | Not Available | Positive | 852294 - 854420 | 80132.2 |
| hypothetical protein | ALO42_101854 | Not Available | Positive | 854417 - 855298 | 34254.5 |
| ribosomal rna small subunit methyltransferase d | ALO42_01095 | Not Available | Negative | 855665 - 856255 | 21260.1 |
| insulinase-like:peptidase m16 | ALO42_01096 | Not Available | Negative | 856255 - 857745 | 52294.6 |
| signal recognition particle receptor ftsy | ALO42_01097 | Not Available | Positive | 859351 - 860835 | 52516.1 |
| rna polymerase sigma factor rpoh | ALO42_01098 | Not Available | Positive | 862653 - 863507 | 32575.6 |
| l-sorbosone dehydrogenase | ALO42_00070 | Not Available | Negative | 863739 - 865031 | 45791.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









