Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein icmf | ALO42_05202 | Not Available | Negative | 833719 - 837234 | 132692.0 |
| type iv/vi secretion system protein | ALO42_101373 | Not Available | Negative | 837236 - 837745 | 19373.4 |
| type vi secretion system protein vasd-2 | ALO42_100833 | Not Available | Negative | 839433 - 839942 | 18971.1 |
| uncharacterized protein | ALO42_03511 | Not Available | Negative | 839939 - 840166 | 8510.28 |
| sigma-54 dependent transcriptional regulator | ALO42_05203 | Not Available | Negative | 840214 - 841815 | 58714.2 |
| clpb protein | ALO42_03513 | Not Available | Negative | 841745 - 844336 | 94834.4 |
| uncharacterized protein | ALO42_03514 | Not Available | Negative | 844346 - 845353 | 38621.8 |
| uncharacterized protein | ALO42_05204 | Not Available | Negative | 845317 - 847146 | 68444.3 |
| uncharacterized protein | ALO42_03516 | Not Available | Negative | 847202 - 847579 | 13905.2 |
| type vi secretion system protein impc | ALO42_100701 | Not Available | Negative | 847624 - 849099 | 55934.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









