Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_03902 | Not Available | Positive | 817035 - 817886 | 30959.2 |
| xenobiotic reductase b | ALO42_05317 | Not Available | Negative | 818026 - 819093 | 38584.8 |
| major facilitator superfamily transporter | ALO42_03904 | Not Available | Negative | 819097 - 820263 | 39876.1 |
| arsr family transcriptional regulator | ALO42_03905 | Not Available | Negative | 820292 - 820606 | 11675.0 |
| acyl carrier protein phosphodiesterase | ALO42_100345 | Not Available | Positive | 820681 - 821370 | 25743.3 |
| uncharacterized protein | ALO42_03906 | Not Available | Negative | 821328 - 822122 | 28988.4 |
| uncharacterized protein | ALO42_03907 | Not Available | Negative | 822122 - 822889 | 28791.6 |
| beta-lactamase | ALO42_03908 | Not Available | Positive | 823158 - 824264 | 40709.2 |
| uncharacterized protein | ALO42_03909 | Not Available | Positive | 824261 - 824590 | 12351.0 |
| ycei-like family protein | ALO42_03910 | Not Available | Positive | 824680 - 825261 | 21333.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









