Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | ALO42_03893 | Not Available | Negative | 805979 - 807043 | 38636.2 |
| uncharacterized protein | ALO42_03894 | Not Available | Negative | 807105 - 808532 | 51401.4 |
| pyridoxamine 5'-phosphate oxidase family protein | ALO42_05315 | Not Available | Positive | 808726 - 809388 | 24032.6 |
| hypothetical protein | ALO42_101471 | Not Available | Positive | 809369 - 809518 | 5627.82 |
| insulin-cleaving membrane protease | ALO42_03896 | Not Available | Negative | 809519 - 810877 | 47234.0 |
| diguanylate cye | ALO42_05316 | Not Available | Negative | 811058 - 813175 | 79778.1 |
| superoxide dismutase | ALO42_03898 | Not Available | Negative | 813514 - 814095 | 21377.0 |
| arginine exporter protein argo | ALO42_03899 | Not Available | Negative | 814288 - 814890 | 21283.6 |
| chromosome replication initiation inhibitor protein | ALO42_03900 | Not Available | Positive | 814985 - 815884 | 33104.1 |
| nad-dependent epimerase/dehydratase | ALO42_03901 | Not Available | Positive | 815958 - 816950 | 36953.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









