Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hamp/ggdef/eal domain protein | ALO42_00092 | Not Available | Negative | 1496 - 3850 | 85481.2 |
| protein containing plastocyanin/azurin family domain | ALO42_101104 | Not Available | Negative | 3850 - 4599 | 26700.7 |
| lon protease | ALO42_00093 | Not Available | Positive | 4703 - 7120 | 89385.8 |
| chagasin family peptidase inhibitor i42 | ALO42_00094 | Not Available | Positive | 7316 - 7708 | 14080.0 |
| trna -methyltransferase | ALO42_00095 | Not Available | Positive | 7809 - 8552 | 27427.2 |
| trna -methyltransferase | ALO42_100083 | Not Available | Positive | 8549 - 9508 | 36134.5 |
| pyridoxine 5'-phosphate synthase | ALO42_100005 | Not Available | Negative | 9517 - 10320 | 28913.9 |
| dna repair protein reco | ALO42_00096 | Not Available | Negative | 10317 - 11000 | 24975.4 |
| gtpase era | ALO42_00097 | Not Available | Negative | 11061 - 11963 | 33893.9 |
| ribonuclease 3 | ALO42_00098 | Not Available | Negative | 11956 - 12645 | 25575.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









