Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_100432 | Not Available | Negative | 783703 - 784239 | 19486.3 |
| uncharacterized protein | ALO42_03876 | Not Available | Negative | 784259 - 785821 | 57956.1 |
| paar domain-containing protein | ALO42_03877 | Not Available | Negative | 785849 - 786118 | 9130.12 |
| superfamily protein | ALO42_101163 | Not Available | Negative | 786115 - 787794 | 61734.9 |
| putative type vi secretion system effector, vgrg family | ALO42_05314 | Not Available | Negative | 789848 - 792460 | 95446.4 |
| uncharacterized protein | ALO42_03879 | Not Available | Negative | 792724 - 793056 | 11724.8 |
| putative ampg protein | ALO42_100479 | Not Available | Negative | 793085 - 794635 | 56421.4 |
| dna repair protein o6-alkylguanine-dna alkyltransferase | ALO42_03880 | Not Available | Negative | 794690 - 795046 | 12829.4 |
| uncharacterized protein | ALO42_03881 | Not Available | Positive | 795204 - 796211 | 37288.5 |
| 3-ketoacyl- reductase | ALO42_03882 | Not Available | Negative | 796266 - 797036 | 27370.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









