Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALO42_03848 | Not Available | Negative | 749589 - 749960 | 14018.7 |
| lppc family lipoprotein | ALO42_100016 | Not Available | Negative | 749960 - 751897 | 69822.0 |
| hypothetical protein | ALO42_102539 | Not Available | Negative | 751881 - 752024 | 5149.29 |
| ribosomal rna small subunit methyltransferase i | ALO42_03849 | Not Available | Positive | 752055 - 752924 | 31453.0 |
| protein mraz | ALO42_03850 | Not Available | Positive | 753675 - 754130 | 17180.8 |
| ribosomal rna small subunit methyltransferase h | ALO42_03851 | Not Available | Positive | 754133 - 755074 | 34160.0 |
| cell division protein ftsl | ALO42_03852 | Not Available | Positive | 755071 - 755364 | 10945.5 |
| cell division protein ftsi | ALO42_03853 | Not Available | Positive | 755361 - 757091 | 63118.4 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | ALO42_03854 | Not Available | Positive | 757091 - 758554 | 52119.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | ALO42_03855 | Not Available | Positive | 758547 - 759917 | 47234.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









