Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta superfamily hydrolase | ALO42_03839 | Not Available | Positive | 741366 - 742001 | 22806.4 |
| tryptophan--trna ligase | ALO42_03840 | Not Available | Positive | 742041 - 743390 | 49418.7 |
| afg1-like atpase | ALO42_03841 | Not Available | Positive | 743453 - 744547 | 42174.6 |
| helix-turn-helix, arac type | ALO42_05310 | Not Available | Negative | 744626 - 745633 | 38346.9 |
| 50s ribosomal protein l13 | ALO42_03843 | Not Available | Positive | 746026 - 746454 | 15879.3 |
| 30s ribosomal protein s9 | ALO42_03844 | Not Available | Positive | 746469 - 746861 | 14602.7 |
| stringent starvation protein a | ALO42_03845 | Not Available | Positive | 747143 - 747760 | 23392.4 |
| stringent starvation protein b | ALO42_03846 | Not Available | Positive | 747778 - 748197 | 15328.0 |
| transport-associated protein | ALO42_100034 | Not Available | Negative | 748258 - 748836 | 20536.9 |
| phosphoheptose isomerase | ALO42_03847 | Not Available | Negative | 748833 - 749429 | 21445.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









