Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| afg1-like atpase | ALO42_04721 | Not Available | Positive | 698574 - 699011 | 16723.3 |
| erythronate-4-phosphate dehydrogenase | ALO42_02690 | Not Available | Positive | 699055 - 700023 | 35052.9 |
| uncharacterized protein | ALO42_02691 | Not Available | Negative | 700098 - 700268 | 6219.3 |
| abc transporter, transmembrane region:abc transporter | ALO42_02692 | Not Available | Positive | 700556 - 702325 | 64252.7 |
| hypothetical protein | ALO42_02693 | Not Available | Negative | 702385 - 702666 | 10355.2 |
| deddh 3'-5' exonuclease domain protein | ALO42_02694 | Not Available | Negative | 702779 - 703327 | 21088.2 |
| extracellular solute-binding protein | ALO42_100183 | Not Available | Positive | 703574 - 704413 | 31770.3 |
| uncharacterized protein | ALO42_02695 | Not Available | Negative | 704458 - 704625 | 6295.78 |
| ethanolamine permease | ALO42_02696 | Not Available | Negative | 704744 - 706108 | 48086.2 |
| orotidine 5'-phosphate decarboxylase | ALO42_02697 | Not Available | Positive | 706364 - 707098 | 26096.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









