Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative topoisomerasae i protein | ALO42_03349 | Not Available | Positive | 2945994 - 2947064 | 40131.4 |
| Trna,type:leu,anti_codon:taa; | Not Available | Not Available | Positive | 2947232 - 2947317 | Not Available |
| prophage psssm-02, orf76 | ALO42_03350 | Not Available | Positive | 2947503 - 2947847 | 13676.1 |
| Hypothetical protein | ALO42_03351 | Not Available | Negative | 2947862 - 2949106 | 43803.5 |
| Phage-tail assembly-like protein | ALO42_03352 | Not Available | Negative | 2949339 - 2949869 | 18556.8 |
| Glycoside hydrolase family 19 protein | ALO42_03353 | Not Available | Negative | 2949866 - 2950420 | 20197.4 |
| prophage psssm-02, orf71 | ALO42_03354 | Not Available | Negative | 2950459 - 2950689 | 8047.21 |
| Tail fiber protein | ALO42_05460 | Not Available | Negative | 2951746 - 2955290 | 121339.0 |
| hemoglobin family protein, cyanoglobin | ALO42_00090 | Not Available | Negative | 189 - 617 | 15835.4 |
| uncharacterized protein | ALO42_00091 | Not Available | Negative | 617 - 1492 | 31309.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









