Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-1,6-bisphosphate aldolase | ALO42_00565 | Not Available | Positive | 678694 - 679758 | 38575.1 |
| amino acid adenylation | ALO42_04682 | Not Available | Positive | 680158 - 680723 | 20991.9 |
| secretion protein hlyd | ALO42_04719 | Not Available | Negative | 680724 - 681069 | 13238.5 |
| uncharacterized protein | ALO42_01616 | Not Available | Negative | 680985 - 681194 | 7802.93 |
| rnd-type tripartite multidrug efflux system, inner membrane component | ALO42_04720 | Not Available | Negative | 681191 - 683413 | 82053.5 |
| regulatory protein, marr | ALO42_01618 | Not Available | Negative | 683275 - 683727 | 16138.5 |
| alginate lyase | ALO42_01619 | Not Available | Positive | 684233 - 684934 | 26020.5 |
| heavy metal two component sensor histidine kinase | ALO42_01620 | Not Available | Negative | 684954 - 686342 | 51383.3 |
| two-component dna-binding heavy metal response regulator | ALO42_01621 | Not Available | Negative | 686321 - 687010 | 26314.1 |
| uncharacterized protein | ALO42_01622 | Not Available | Positive | 687181 - 687786 | 20828.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









