Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_00555 | Not Available | Negative | 668247 - 668663 | 15489.3 |
| dna ligase b | ALO42_04405 | Not Available | Negative | 668704 - 670389 | 62109.1 |
| s-adenosylmethionine synthase | ALO42_00557 | Not Available | Negative | 670850 - 672040 | 42589.6 |
| regulatory protein, arsr | ALO42_00558 | Not Available | Negative | 672061 - 673056 | 36109.4 |
| transketolase | ALO42_00559 | Not Available | Positive | 673315 - 675312 | 72583.6 |
| d-erythrose-4-phosphate dehydrogenase | ALO42_00560 | Not Available | Positive | 675432 - 676475 | 38386.0 |
| phosphoglycerate kinase | ALO42_00561 | Not Available | Positive | 676492 - 677661 | 40468.9 |
| putative lipoprotein | ALO42_00562 | Not Available | Positive | 677671 - 677919 | 9076.85 |
| uncharacterized protein | ALO42_00563 | Not Available | Positive | 678004 - 678201 | 6790.05 |
| putative membrane-bound lysozyme-inhibitor of c-type lysozyme | ALO42_00564 | Not Available | Positive | 678254 - 678580 | 11794.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









