Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator of sugar metabolism, deor family | ALO42_00537 | Not Available | Negative | 642102 - 642926 | 29435.5 |
| sorbitol and other polyol-specific dehydrogenase | ALO42_00538 | Not Available | Negative | 643057 - 643830 | 27181.5 |
| various polyols abc-type transport system, periplasmic substrate-binding protein | ALO42_00539 | Not Available | Negative | 643870 - 645186 | 47900.8 |
| arac family transcriptional regulator | ALO42_00540 | Not Available | Positive | 645421 - 646368 | 35789.1 |
| na+/h+ antiporter nhap | ALO42_04399 | Not Available | Negative | 646369 - 647628 | 45181.9 |
| uncharacterized protein | ALO42_00542 | Not Available | Negative | 647908 - 648237 | 12184.0 |
| uncharacterized protein | ALO42_00543 | Not Available | Positive | 648456 - 648677 | 8012.45 |
| outer membrane porin | ALO42_00544 | Not Available | Positive | 649149 - 650474 | 48558.5 |
| hypothetical protein | ALO42_100740 | Not Available | Negative | 650717 - 651115 | 14793.7 |
| yd repeat protein | ALO42_04400 | Not Available | Negative | 651235 - 652350 | 43522.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









