Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine abc-type transport system, atp-binding protein | ALO42_00521 | Not Available | Negative | 615636 - 616466 | 30733.4 |
| histidine abc-type transport system, permease protein | ALO42_00522 | Not Available | Negative | 616463 - 617314 | 30843.1 |
| histidine abc-type transport system, periplasmic substrate-binding protein | ALO42_00523 | Not Available | Negative | 617388 - 618356 | 35073.2 |
| urocanate hydratase | ALO42_04394 | Not Available | Negative | 618470 - 620299 | 66644.0 |
| high-affinity choline uptake protein bett | ALO42_100063 | Not Available | Positive | 620697 - 622772 | 76278.8 |
| laci family transcriptional regulator | ALO42_00525 | Not Available | Negative | 622986 - 624032 | 37662.0 |
| tonb-dependent receptor:tonb box | ALO42_04395 | Not Available | Positive | 624204 - 626519 | 84134.4 |
| putative nitrilotriacetate monooxygenase, component a | ALO42_00526 | Not Available | Positive | 626554 - 627879 | 48063.8 |
| alkanesulfonate transporter substrate-binding subunit | ALO42_00527 | Not Available | Positive | 627980 - 628915 | 33945.8 |
| aldo/keto reductase | ALO42_00528 | Not Available | Positive | 628997 - 630034 | 38225.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









