Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase gcn5 | ALO42_00572 | Not Available | Negative | 594858 - 595433 | 21480.1 |
| uncharacterized protein | ALO42_00573 | Not Available | Negative | 596170 - 597252 | 39874.0 |
| amino acid adenylation | ALO42_01505 | Not Available | Negative | 597277 - 598149 | 31531.8 |
| threonine dehydratase, biosynthetic | ALO42_00506 | Not Available | Positive | 598150 - 598427 | 10374.2 |
| putative integral membrane protein | ALO42_00507 | Not Available | Positive | 598591 - 599019 | 15433.7 |
| putative phosphoserine phosphatase | ALO42_00508 | Not Available | Negative | 599033 - 599689 | 24877.5 |
| rna pyrophosphohydrolase | ALO42_04390 | Not Available | Positive | 599790 - 600311 | 20333.5 |
| phosphoenolpyruvate-protein phosphotransferase | ALO42_00510 | Not Available | Positive | 600333 - 602612 | 83208.0 |
| hypothetical protein | ALO42_102253 | Not Available | Negative | 602640 - 602975 | 12338.7 |
| prolipoprotein diacylglyceryl transferase | ALO42_00511 | Not Available | Positive | 603000 - 603812 | 30160.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









