Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | ALO42_02797 | Not Available | Positive | 2841197 - 2841403 | 7424.89 |
| Hypothetical protein | ALO42_02798 | Not Available | Positive | 2841651 - 2842037 | 14176.1 |
| Tyrosine-type recombinase/integrase | ALO42_03341 | Not Available | Negative | 2938691 - 2939656 | 36736.2 |
| putative toxin-antitoxin system antitoxin component | ALO42_03342 | Not Available | Positive | 2939880 - 2940344 | 16876.2 |
| putative quinone oxidoreductase, yhdh/yhfp family | ALO42_03343 | Not Available | Negative | 2940350 - 2941345 | 34966.1 |
| regulatory protein, tetr | ALO42_03344 | Not Available | Negative | 2941383 - 2942027 | 23970.8 |
| nitronate monooxygenase | ALO42_03345 | Not Available | Positive | 2942183 - 2943262 | 38041.6 |
| molybdenum abc-type transport system, periplasmic substrate-binding protein | ALO42_05148 | Not Available | Positive | 2943286 - 2944131 | 30122.8 |
| molybdate abc-type transport system, permease protein | ALO42_03347 | Not Available | Positive | 2944132 - 2944812 | 23984.0 |
| Abc transporter | ALO42_03348 | Not Available | Positive | 2944816 - 2945904 | 39955.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









