Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate phosphodiesterase domain protein | ALO42_02464 | Not Available | Positive | 556055 - 556837 | 29033.7 |
| putative atp-dependent zinc protease | ALO42_02465 | Not Available | Positive | 556854 - 557330 | 17497.3 |
| putative alpha-l-glutamate ligase | ALO42_02466 | Not Available | Positive | 557327 - 558232 | 32681.2 |
| proton/glutamate symporter | ALO42_100206 | Not Available | Positive | 558587 - 560017 | 51300.2 |
| glutathione s-transferase | ALO42_02467 | Not Available | Negative | 560060 - 560725 | 24525.8 |
| uncharacterized protein | ALO42_02468 | Not Available | Positive | 560908 - 561189 | 10551.4 |
| psie superfamily protein | ALO42_02469 | Not Available | Positive | 561406 - 561654 | 8659.39 |
| adenylate cye | ALO42_02470 | Not Available | Positive | 561837 - 564683 | 108219.0 |
| regulator of nucleoside diphosphate kinase | ALO42_02471 | Not Available | Negative | 564800 - 565246 | 16093.1 |
| uncharacterized protein | ALO42_02472 | Not Available | Negative | 565342 - 565608 | 10030.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









