Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase | ALO42_02457 | Not Available | Negative | 546490 - 547158 | 25267.2 |
| hypothetical protein | ALO42_101100 | Not Available | Negative | 547330 - 547470 | 5041.02 |
| n-acetyltransferase gcn5 | ALO42_02458 | Not Available | Positive | 547693 - 548550 | 30713.1 |
| uncharacterized protein | ALO42_02459 | Not Available | Positive | 548849 - 549562 | 25458.1 |
| gnat family acetyltransferase | ALO42_02460 | Not Available | Negative | 549704 - 550204 | 18389.1 |
| putative immunity protein | ALO42_100724 | Not Available | Positive | 551185 - 551616 | 16035.3 |
| uncharacterized protein | ALO42_04924 | Not Available | Positive | 551857 - 552309 | 17501.0 |
| phosphoenolpyruvate carboxykinase | ALO42_02461 | Not Available | Negative | 552677 - 554221 | 55959.3 |
| 33 kda chaperonin | ALO42_02462 | Not Available | Negative | 554401 - 555303 | 33222.4 |
| heat shock protein 15 | ALO42_02463 | Not Available | Negative | 555480 - 555887 | 15331.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









