Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase | ALO42_04921 | Not Available | Negative | 534124 - 535692 | 56289.9 |
| acetylornithine deacetylase | ALO42_04922 | Not Available | Negative | 535696 - 536853 | 42056.7 |
| fad dependent oxidoreductase | ALO42_02449 | Not Available | Negative | 536850 - 538019 | 42617.2 |
| pyridine nucleotide-disulfide oxidoreductase family protein | ALO42_02450 | Not Available | Negative | 538016 - 539425 | 49895.0 |
| putative 2fe-2s ferredoxin domain protein | ALO42_02451 | Not Available | Negative | 539404 - 539715 | 11501.9 |
| oligopeptide/dipeptide abc-type transport system, atp-binding protein | ALO42_02452 | Not Available | Negative | 539712 - 541553 | 65821.9 |
| oligopeptide/dipeptide/nickel abc-type transport system, permease protein | ALO42_02453 | Not Available | Negative | 541555 - 542433 | 31158.9 |
| oligopeptide/dipeptide/nickel abc-type transport system, permease protein | ALO42_02454 | Not Available | Negative | 542430 - 543386 | 33850.4 |
| oligopeptide/dipeptide/nickel abc-type transport system, periplasmic substrate-binding protein | ALO42_02455 | Not Available | Negative | 543418 - 545055 | 59110.3 |
| fad-binding oxidoreductase | ALO42_02456 | Not Available | Negative | 545149 - 546444 | 46723.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









