Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_04750 | Not Available | Negative | 522182 - 522668 | 17417.8 |
| extracellular solute-binding protein | ALO42_02439 | Not Available | Positive | 522792 - 524675 | 70957.7 |
| nickel/oligopeptide abc-type transport system, permease protein | ALO42_02440 | Not Available | Positive | 524677 - 525744 | 38750.9 |
| binding-protein-dependent transport (system) inner membrane component | ALO42_02441 | Not Available | Positive | 525744 - 526766 | 37923.5 |
| nickel/dipeptide/oligopeptide abc-type transport system, atp-binding protein | ALO42_02442 | Not Available | Positive | 526768 - 528351 | 58505.3 |
| chemotaxis sensory transducer | ALO42_04920 | Not Available | Negative | 528361 - 528540 | 6226.32 |
| asnc family transcriptional regulator | ALO42_02443 | Not Available | Negative | 530199 - 530687 | 18497.5 |
| uncharacterized protein | ALO42_02444 | Not Available | Negative | 530735 - 531409 | 25258.4 |
| 4-aminobutyrate aminotransferase | ALO42_02445 | Not Available | Negative | 531473 - 532792 | 47025.1 |
| d-isomer specific 2-hydroxyacid dehydrogenase | ALO42_02446 | Not Available | Positive | 532850 - 533992 | 42503.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









