Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_02184 | Not Available | Negative | 502390 - 502938 | 20552.5 |
| uncharacterized protein | ALO42_05453 | Not Available | Negative | 502935 - 504581 | 59198.5 |
| m32 family metallpeptidase | ALO42_02186 | Not Available | Positive | 504457 - 505281 | 29403.6 |
| 2-isopropylmalate synthase | ALO42_02187 | Not Available | Positive | 505654 - 507324 | 61495.7 |
| oxaloacetate decarboxylase | ALO42_02188 | Not Available | Positive | 507681 - 508550 | 31335.4 |
| uncharacterized protein | ALO42_02189 | Not Available | Negative | 508662 - 509108 | 14794.1 |
| nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase | ALO42_02190 | Not Available | Negative | 509168 - 509959 | 29499.9 |
| methionine aminotransferase | ALO42_02191 | Not Available | Negative | 509947 - 511095 | 42468.7 |
| gtpase der | ALO42_04874 | Not Available | Negative | 511205 - 512689 | 55468.7 |
| outer membrane protein assembly factor bamb | ALO42_04875 | Not Available | Negative | 512816 - 513985 | 41590.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









