Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO42_02169 | Not Available | Negative | 478109 - 478327 | 8088.67 |
| gamma carbonic anhydrase-like protein | ALO42_02170 | Not Available | Negative | 478327 - 478851 | 18665.5 |
| putative coenzyme a pyrophosphatase | ALO42_02171 | Not Available | Negative | 478921 - 479517 | 22323.7 |
| mutt/nudix family protein | ALO42_02172 | Not Available | Positive | 479668 - 480219 | 20728.9 |
| l,d-transpeptidase catalytic domain protein | ALO42_02173 | Not Available | Positive | 480281 - 480844 | 21337.8 |
| uncharacterized protein | ALO42_02174 | Not Available | Negative | 480966 - 481277 | 11502.6 |
| phosphoribosylformylglycinamidine synthase | ALO42_04869 | Not Available | Negative | 481283 - 485179 | 140997.0 |
| membrane-bound lytic murein transglycosylase f | ALO42_02176 | Not Available | Positive | 485393 - 486889 | 56024.6 |
| multicopper oxidase | ALO42_02177 | Not Available | Negative | 487395 - 488933 | 56872.4 |
| uncharacterized protein | ALO42_02178 | Not Available | Negative | 488944 - 490920 | 73112.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









