Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | ALO42_102077 | Not Available | Negative | 2835097 - 2835420 | 11518.0 |
| Integrase | ALO42_02791 | Not Available | Negative | 2835436 - 2836716 | 48284.0 |
| Nuclease | ALO42_02792 | Not Available | Negative | 2836713 - 2837144 | 16059.9 |
| Hypothetical protein | ALO42_02793 | Not Available | Negative | 2837141 - 2837437 | 10770.9 |
| Hypothetical protein | ALO42_02794 | Not Available | Negative | 2837434 - 2837922 | 17723.4 |
| prophage psssm-03, orf42 | ALO42_101337 | Not Available | Negative | 2838102 - 2838521 | 15355.7 |
| Attr | Not Available | Not Available | Positive | 2838369 - 2838381 | Not Available |
| Putative lambda repressor | ALO42_102317 | Not Available | Positive | 2839776 - 2840036 | 9396.48 |
| Hypothetical protein | ALO42_02795 | Not Available | Positive | 2840054 - 2840401 | 12999.7 |
| Luxr family transcriptional regulator | ALO42_02796 | Not Available | Positive | 2840733 - 2841134 | 14624.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









