Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-specific exonuclease recj | ALO42_04861 | Not Available | Negative | 453840 - 455642 | 65763.6 |
| yaeq | ALO42_02152 | Not Available | Negative | 455618 - 456160 | 20734.7 |
| putative extracellular solute-binding protein | ALO42_100679 | Not Available | Positive | 456447 - 457325 | 32595.7 |
| uncharacterized protein | ALO42_02153 | Not Available | Negative | 457497 - 457805 | 10944.2 |
| luxr family dna-binding response regulator | ALO42_100279 | Not Available | Positive | 458010 - 458744 | 26748.7 |
| two component sensory box histidine kinase/response regulator | ALO42_04863 | Not Available | Negative | 460110 - 463802 | 135884.0 |
| threonine synthase | ALO42_02155 | Not Available | Negative | 463860 - 465269 | 51750.0 |
| homoserine dehydrogenase | ALO42_02156 | Not Available | Negative | 465368 - 466672 | 46212.8 |
| glutaredoxin | ALO42_02157 | Not Available | Negative | 466809 - 467549 | 26377.0 |
| tyrosine recombinase xerd | ALO42_02158 | Not Available | Negative | 467695 - 468597 | 33945.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









