Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain ICMP4394 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1237723 bp
Thymine Count
1227659 bp
Guanine Count
1764699 bp
Cytosine Count
1781727 bp
Genome Length
6012246 bp
Protein-coding Genes
5103 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis response regulator protein-glutamate methylesterase | ALO42_04858 | Not Available | Negative | 435623 - 436654 | 36792.0 |
| response regulator receiver:chew-like protein:atp-binding region, atpase-like:hpt | ALO42_02142 | Not Available | Negative | 436630 - 438981 | 85941.0 |
| chemotaxis signal transduction protein wspd | ALO42_02143 | Not Available | Negative | 438978 - 439667 | 25000.7 |
| chemotaxis protein methyltransferase wspc | ALO42_02144 | Not Available | Negative | 439667 - 440947 | 46263.2 |
| chew domain-containing protein wspb | ALO42_02145 | Not Available | Negative | 440944 - 441480 | 19969.1 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALO42_02146 | Not Available | Negative | 441488 - 443110 | 58770.6 |
| leucine-rich repeat protein | ALO42_02147 | Not Available | Positive | 443408 - 449368 | 223261.0 |
| tellurium resistance terb-like protein 3 | ALO42_02148 | Not Available | Negative | 449427 - 450173 | 26461.6 |
| pas protein | ALO42_02149 | Not Available | Positive | 450472 - 452559 | 76346.7 |
| xenobiotic reductase | ALO42_02150 | Not Available | Negative | 452621 - 453772 | 42333.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









